Insertion junction: CLIP2.041388_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041388
Chromosome:chromosome 16
Location:1092020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649550 (1 of 83) IPR029044 - Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAGCCCACAACTGCCAGACACGCCGCACCAGCGCGGTTCGTAGCGGT
Internal bar code:GGAACAACCGCCCAAGTTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCGCACCTTTTCTCTAA
Suggested primer 2:CATAAACGCAAGCTCGTCCG