Insertion junction: CLIP2.041391_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041391
Chromosome:chromosome 12
Location:2162594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509500 (1 of 1) IPR000595//IPR002048//IPR011992//IPR018490//IPR029530 - Cyclic nucleotide-binding domain // EF-hand domain // EF-hand domain pair // Cyclic nucleotide-binding-like // Cell division control protein 31 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGCACTGCCCCTCCACGATGAGCTCCAGCCCCGCCGGCGCCGCGCC
Internal bar code:CAGGAGCAGAGAAATTTTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1077
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATGTCAGCCTCGCAACT
Suggested primer 2:ACTTGCGCAGGTCTTTCGTA