Insertion junction: CLIP2.041396_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041396
Chromosome:chromosome 9
Location:1729814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398400 TRP5 Transient receptor potential ion channel protein; (1 of 46) PF00520 - Ion transport protein (Ion_trans) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACAAGATGGAGACCACAACCGCGCGCGTCTGAAGAAGGAGCTCTGGCT
Internal bar code:TTTAGTATTCCATTATAGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:6665
LEAP-Seq percent confirming:31.0345
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGCTGCTATGTAAGGGT
Suggested primer 2:TTCTCAGCAACGGAGGTCAC