Insertion junction: CLIP2.041401_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041401
Chromosome:chromosome 3
Location:6679670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195410 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCTTGCCGCATGAGCTTCAGCTTGTCTTCAGCTCGCTTGCTGTCCTG
Internal bar code:TTCATAGTTTGGGAAGCGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1778
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGTGTCTCCGACCTGGCT
Suggested primer 2:GCACCTGATCCTCTACGAGC