Insertion junction: CLIP2.041418_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041418
Chromosome:chromosome 12
Location:1018671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801359 (1 of 1) IPR000104//IPR001204 - Antifreeze protein, type I // Phosphate transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGTTGCTGGTGGCCCGACGGCGCCGGCACTGGCAGCAGCAAGCCTGG
Internal bar code:GGCGGTGGACTTACGCTGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1240
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAGAGCGCTCAAGCAAGC
Suggested primer 2:GACAGCAGCGGAGACATCAT