Insertion junction: CLIP2.041425_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041425
Chromosome:chromosome 9
Location:3657640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397142 ADF1,TRP15 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL; Acid-induced Ca transient receptor channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCATCCGGAGCCTGTAGGCGCTAGGGAGAGCGGGACGGGACGGGGTAA
Internal bar code:ACTTGCGCGGGGTAGCCTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1505
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTGTCGGTCTTGTCCAG
Suggested primer 2:CCAGCAAAACATCCCGCAAA