Insertion junction: CLIP2.041439_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041439
Chromosome:chromosome 6
Location:8755867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310800 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTGTGTTTGCCCGCCCGCCGCCCGCCCGCCGCAGGCCAGCACCATC
Internal bar code:TAGTTGGAGGCGTCGGCTGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2813
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGAGTGCTGACGGTACC
Suggested primer 2:AGTCTTACTCATACGCCGCG