Insertion junction: CLIP2.041446_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041446
Chromosome:chromosome 8
Location:3058787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375400 GSM1 (1 of 1) PTHR11850//PTHR11850:SF102 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED; Gamete-specific minus 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAAGGAGGAGCGGGGGTGGGAGTGGAGCGGGGATGGTCACAAAGGGT
Internal bar code:AGTTGCAGAGGTGTCGGAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1351
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTCTGGCAATATCGTGG
Suggested primer 2:ACTCCCATGACAACGACACC