Insertion junction: CLIP2.041447_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041447
Chromosome:chromosome 16
Location:1098240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649600 PUF4 Puf protein; (1 of 1) K14790 - nucleolar protein 9 (NOP9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCGACCGGGCTGCTATTACCTGCTATCCCTATCGTGGATCTAGTTGC
Internal bar code:AGACGATGGCATGCGTATAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:479
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTCTCACCTTGTTCTCC
Suggested primer 2:CAAACCCTGGTCGACGATGA