Insertion junction: CLIP2.041449_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041449
Chromosome:chromosome 1
Location:6568181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800118 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCTGGAGCCATTGCACTGAACTGATGTCATGGGCAAGCACAGCGGGT
Internal bar code:TTCTGTGCTCAGTGAGTTCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:425
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTCTTATTCGTTGCCGC
Suggested primer 2:CCCAAACACACACAGAAGCG