Insertion junction: CLIP2.041457_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041457
Chromosome:chromosome 7
Location:6259720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g356600 (1 of 1) PF08007 - Cupin superfamily protein (Cupin_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACTGCATGAGGAAGTCGGCCGCCATGGCCTCCACCGCCGGGCTGACC
Internal bar code:TGCGTACGCTAATGGCCCTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1571
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTGCCGTAATAGCTTTG
Suggested primer 2:TGTGTGTGTGTGTGTGTCCA