Insertion junction: CLIP2.041459_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041459
Chromosome:chromosome 9
Location:1121579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401550 (1 of 140) IPR002048 - EF-hand domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGAAGCCGCCAGCAGTGATGCCGGCGGCGGCGGCGGGGGAGGCGGCGG
Internal bar code:TTCTCACCGAAAATACTGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4085
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCACTCAAACCTCTCGC
Suggested primer 2:GCGCCTCCACTGATGATACA