Insertion junction: CLIP2.041475_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041475
Chromosome:chromosome 3
Location:112837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143807 3'UTR
Cre03.g143827 FBB7 Flagellar/basal body protein 7; (1 of 1) IPR001680//IPR011047//IPR011048//IPR017986 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // Cytochrome cd1-nitrite reductase-like, haem d1 domain // WD40-repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCTTTCTTGTCTGCAACTGGAAGCAGTTTGCAAGCCTGATCACTAAT
Internal bar code:AGATTTCGAACGTTCAAATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1999
LEAP-Seq percent confirming:73.913
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGACCCTTGCTGAAGCT
Suggested primer 2:GCGGTCCCAGAACTTGATGA