Insertion junction: CLIP2.041477_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041477
Chromosome:chromosome 3
Location:486074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145007 CDS
lncRNA_TCONS_00148410 CDS
lncRNA_TCONS_00148950 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATCTTGCCTGCACTGTCCCGCTGGGGGCTGTAGTACACCTTGCCGAA
Internal bar code:CCAAACATACGGGTTATAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2926
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGGGTGCATTTTGTGG
Suggested primer 2:AGGTTAGAGTAGCGGGGGTT