Insertion junction: CLIP2.041489_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041489
Chromosome:chromosome 12
Location:3647416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513400 EBG1 Endo-1%252C3(4)-beta-glucanase; (1 of 1) 3.2.1.6 - Endo-1,3(4)-beta-glucanase / Laminarinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGGCTGTCTTGGGGTGTGAAGCCCATCTGTAGTTGCATAGGTAGAGG
Internal bar code:ACATACAAATATGCGCACCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3785
LEAP-Seq percent confirming:19.1781
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:59
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGCATGTTTACGAGCCG
Suggested primer 2:AGGGCGGACATGTGAAAGAG