Insertion junction: CLIP2.041491_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041491
Chromosome:chromosome 1
Location:4324546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029400 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATGGTGAGGCCGGTGGGGGAGCTGACCAGGCCGCCCATGTGGATCAC
Internal bar code:CCGAGCAGGTGGGGAACGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:623
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCATGGACGTGTTCGAG
Suggested primer 2:AGGAGCTGGAGGAAGAGGAG