Insertion junction: CLIP2.041491_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041491
Chromosome:chromosome 1
Location:4324557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029400 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACATCGGCGGCGAAGGCGACCCGTACACACCCCACGCCAACGGCGAC
Internal bar code:CCGAGCAGGTGGGGAACGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1783
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGCTGGAGGAAGAGGAG
Suggested primer 2:TGGTCATGGACGTGTTCGAG