Insertion junction: CLIP2.041493_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041493
Chromosome:chromosome 6
Location:2015869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265350 HTA42,HTA12,HTA11 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTGCCCTTGCCGCGACCAGCCATTGTGTTGGGTTGGAGTTGAAGAAA
Internal bar code:CATAATGTGACACCATTAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:4086
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTAGCCCGAGGTGAACTT
Suggested primer 2:ACCGAGTTTGAGGGAAGCAG