Insertion junction: CLIP2.041499_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041499
Chromosome:chromosome 12
Location:663943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493250 FAP358 (1 of 2) PTHR24353//PTHR24353:SF37 - CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE // PROTEIN KINASE DC1-RELATED; Flagellar Associated Protein 358 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGGGCTGGCGATCAGCAGGGGATGTTTGGCGGGCGGCTGTCGAGCGC
Internal bar code:CGCCCCACCATTCGGGTTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2078
LEAP-Seq percent confirming:69.4444
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGATGCAGATGCTGTCGC
Suggested primer 2:TGGCAATTAAAAACGCCCCG