Insertion junction: CLIP2.041501_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041501
Chromosome:chromosome 9
Location:5536546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409300 (1 of 5) PF06863 - Protein of unknown function (DUF1254) (DUF1254) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCCTCCTGGGTGGGCGAGCGGATCAGCTTGAACTCCTGTGGGGCGGT
Internal bar code:GGTATCGACATTCGTATTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:285
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTCAATGTGCTGGGCAG
Suggested primer 2:GCGGGTCAGGGAAACAGTAA