Insertion junction: CLIP2.041501_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041501
Chromosome:chromosome 9
Location:5536584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409300 (1 of 5) PF06863 - Protein of unknown function (DUF1254) (DUF1254) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACTGGACACTCACCTGGAACTTCACCCGGTGAGCGCCTGTGCGAGCG
Internal bar code:GGTATCGACATTCGTATTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1319
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGTCAGGGAAACAGTAA
Suggested primer 2:GTGTTCAATGTGCTGGGCAG