Insertion junction: CLIP2.041502_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041502
Chromosome:chromosome 3
Location:2574622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160000 HDA3 (1 of 3) PTHR10625//PTHR10625:SF102 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 10; RPD3/HDA1 type histone deacetylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGGCAACCTGGACTTTGGCGAGCCCATGCAGGACAACGACGGCGACG
Internal bar code:CTACTTGGCGGCTAGATTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1235
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTGACTCGCCCTCAATT
Suggested primer 2:CTGGGAATGAGTGCCGATGT