Insertion junction: CLIP2.041502_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041502
Chromosome:chromosome 3
Location:2574623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160000 HDA3 (1 of 3) PTHR10625//PTHR10625:SF102 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 10; RPD3/HDA1 type histone deacetylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTTACGTCCATCACACGCCGCCGCCGCTCGCGTTCCTCATCGTCAT
Internal bar code:CTACTTGGCGGCTAGATTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1677
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGAATGAGTGCCGATGT
Suggested primer 2:ACGTTGACTCGCCCTCAATT