Insertion junction: CLIP2.041505_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041505
Chromosome:chromosome 16
Location:2407462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTTAACAACACACTCTCTGCCTTAGTCCCACCAGCATCGGCCTACCG
Internal bar code:ACTAACGTTAGGGAGTCAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1558
LEAP-Seq percent confirming:43.3333
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCATTGTTGCTGTCTGTG
Suggested primer 2:ATTTTGGGTAGTGAGCGGGG