Insertion junction: CLIP2.041506_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041506
Chromosome:chromosome 8
Location:1106768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362650 IFT140 Intraflagellar Transport Protein 140; (1 of 1) PTHR15722//PTHR15722:SF7 - IFT140/172-RELATED // INTRAFLAGELLAR TRANSPORT PROTEIN 140 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGATAGATGTATGAATACGGTGGACAGCACTTTACCACCTGAGCCTG
Internal bar code:TTTAGGATTGGTGCAATCCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2589
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTTCCCCTTGAGCTATC
Suggested primer 2:GAGGCCATCCGCTACTACAC