Insertion junction: CLIP2.041508_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041508
Chromosome:chromosome 3
Location:2094444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156400 SMM8 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) 2.1.1.145 - Trans-aconitate 3-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGGGGAAAGGGTTGGAGGGGATGGAAGGGTGGGAGGGGGCCGGGAGA
Internal bar code:CACCGTGATCGATTGTCCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1234
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCAGTGCGGAACAGAGCA
Suggested primer 2:GGTACAAATCCGCGACATGC