Insertion junction: CLIP2.041508_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041508
Chromosome:chromosome 3
Location:2094446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156400 SMM8 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) 2.1.1.145 - Trans-aconitate 3-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGTGTTGTCCCTCTCGCCACCGCTGCTGCTGCCCCCCCCCCGCACGCA
Internal bar code:ACCACGGTGGTGCTGGTTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:92
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACAAATCCGCGACATGC
Suggested primer 2:ATTCAGTGCGGAACAGAGCA