Insertion junction: CLIP2.041512_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041512
Chromosome:chromosome 4
Location:3986485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00242258

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTTACAGCCGCCACGACGACGCGGCTGGGCCCCCTGCAGGCGGCCAC
Internal bar code:GTCCTACGGCGATTGCAGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2020
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCGCCACTCATACACTG
Suggested primer 2:GTCCAGGCAGGTCGTTAACA