Insertion junction: CLIP2.041514_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041514
Chromosome:chromosome 17
Location:1455177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706550 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAAAATGGGGTCTGCTGGCGGAGCCCCGGCCTCTGACGGCTGTCTTG
Internal bar code:AGTGTGGGGAGCGATTGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1733
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TAAATGGTGAAGGTGGGGGC
Suggested primer 2:AGGGCATGTCTGTTGAGGTG