Insertion junction: CLIP2.041516_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041516
Chromosome:chromosome 16
Location:7534375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683035 (1 of 2) IPR003593//IPR027417 - AAA+ ATPase domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGGCAGCGGCAGCGGCAGGAGGCGCCAACACCGCGGCCCCTGATGTA
Internal bar code:TTACGAGAAGGTCTTGTTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4243
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGATACATCGCCAGCACG
Suggested primer 2:GTAGATGGCGGTGGTGTTCA