Insertion junction: CLIP2.041516_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041516
Chromosome:chromosome 16
Location:7534391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683035 (1 of 2) IPR003593//IPR027417 - AAA+ ATPase domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCCGCTGCTGAGGTGCCGAACAAGGTCCTTCGTGCTCCTGCTGCGG
Internal bar code:CACTTAAAAGGGCTACAAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2767
LEAP-Seq percent confirming:78.481
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGATGGCGGTGGTGTTCA
Suggested primer 2:AGAGATACATCGCCAGCACG