Insertion junction: CLIP2.041517_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041517
Chromosome:chromosome 8
Location:3105801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375801 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAATTTAAGTACTGCACATCGAGGTAAGCGAGGGATGCGGCCTTTGGA
Internal bar code:TATGTTGCGGTATATATGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:953
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTATAATGACGGGGCTGGGG
Suggested primer 2:CGTTCCCAGGGTATCGGATG