Insertion junction: CLIP2.041521_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041521
Chromosome:chromosome 8
Location:3243992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377050 (1 of 1) 4.6.1.14 - Glycosylphosphatidylinositol diacylglycerol-lyase / VSG-lipase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATGTGTAGGAGGCTAGGAGCCACCCCAAGATACGCTACGTCGTTGCG
Internal bar code:TTAATAAAAGATGGTGTTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1179
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTCAGACACGTCCTGCA
Suggested primer 2:GACAAGGTCCGAGTCCGTTT