Insertion junction: CLIP2.041527_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041527
Chromosome:chromosome 10
Location:2598017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436800 (1 of 2) PF01833//PF07691//PF10162 - IPT/TIG domain (TIG) // PA14 domain (PA14) // G8 domain (G8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCGCGCCCGGCACTGTGACGGTGCCGCTGGTGCTGACAGGAATCAGC
Internal bar code:TAGGTTAAGAGGGAAAGAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2849
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGCGTCAGGTTGGTACA
Suggested primer 2:TATTCAACGCGACCACCCAA