Insertion junction: CLIP2.041529_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041529
Chromosome:chromosome 2
Location:6726263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387541 (1 of 33) IPR015797 - NUDIX hydrolase domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGCCTACACGTTCCTAGGTAAGAGCGCGGGCAGCAGTTGCACGTTGC
Internal bar code:TTAGTCCTTTGCGGCGCACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1561
LEAP-Seq percent confirming:66.1017
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCAACCTCCGTTACGTTG
Suggested primer 2:AGAACTGAATTCCCGCCAGG