Insertion junction: CLIP2.041534_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041534
Chromosome:chromosome 3
Location:3149787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164800 (1 of 1) PTHR24361:SF363 - PROTEIN KINASE-RELATED outside_mRNA
Cre03.g164850 (1 of 5) PF13391 - HNH endonuclease (HNH_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCACCCGCGTATGTCGTGCCTCTTGCGCGGCCTTCTTCCTCCGCCTT
Internal bar code:CACCGCTGACGTATCTGCACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATCCTACCCTCCACCTG
Suggested primer 2:TGGACATCACGTGGAACCAG