Insertion junction: CLIP2.041537_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041537
Chromosome:chromosome 16
Location:6008262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678400 (1 of 1) PTHR22847//PTHR22847:SF412 - WD40 REPEAT PROTEIN // TRANSDUCIN/WD40 DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGATGGTACCCAGACCCGCACGCTGGCAAGTGCTGTGCCCGCAGCCTC
Internal bar code:TATGTTTGTGGTTCGTTTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2449
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGCTCGTAAATCCAACT
Suggested primer 2:AAGCAACGAGACGGACCAAT