Insertion junction: CLIP2.041538_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041538
Chromosome:chromosome 17
Location:2413409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714450 KUP3 (1 of 5) K03549 - KUP system potassium uptake protein (kup); Potassium ion uptake transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAACACGCAACACCAGTCCCAGCAGGCGCAAGCTCCAACACAACGCA
Internal bar code:CAGACAGGGATTGGAGAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1253
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCCCCTTCCCGCTATCT
Suggested primer 2:TAGAGTGACCACCCTCCCTG