Insertion junction: CLIP2.041553_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041553
Chromosome:chromosome 17
Location:6564826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745097 FAS15,FLA10 FAS1 domain containing protein;; (1 of 1) IPR016112 - Group II dsDNA virus coat/capsid protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAAAGCGCGGCTGTGCGGCGCAGCGCACGGGTGCACACACACACACAC
Internal bar code:CCTATGGTGAGTCATCGCAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTTATGCGCCTGACAGCT
Suggested primer 2:GAGCAAAGCTACATTCGCGG