Insertion junction: CLIP2.041557_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041557
Chromosome:chromosome 12
Location:281527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801338 (1 of 2) K08592 - sentrin-specific protease 1 [EC:3.4.22.68] (SENP1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCACCAGCAGGCCACGGTAAAACTCAGCTCGTACGGGACCACATTGT
Internal bar code:TTCCTAGGGTTATTTTGGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3326
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCAGCAGCGTCACGTACT
Suggested primer 2:GTGGCATATGTAGGGAGGGC