Insertion junction: CLIP2.041559_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041559
Chromosome:chromosome 1
Location:5720272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040950 (1 of 1) PF02816//PF13519 - Alpha-kinase family (Alpha_kinase) // von Willebrand factor type A domain (VWA_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCGGCCCGCATCATGCTGCTATGCAGGTGGAGTGGGGCGTGGCGCAC
Internal bar code:TATGACTCCTCACTTGTGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2520
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTTGTTCCTGCCGACAC
Suggested primer 2:TCCACTGTTCAATGCCTCCC