Insertion junction: CLIP2.041563_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041563
Chromosome:chromosome 2
Location:1161343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081176 (1 of 6) IPR001537//IPR029028 - tRNA/rRNA methyltransferase, SpoU type // Alpha/beta knot methyltransferases CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCAGTACATCCTCTACCGTGCGGGCCACTACGACTCTATTGCTGAG
Internal bar code:TGGGTATACTCCATGAATGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1285
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAACCGTGAACACACTTC
Suggested primer 2:CTTGAGAGCGTGTGGACACT