Insertion junction: CLIP2.041566_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041566
Chromosome:chromosome 16
Location:7673600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685613 (1 of 1) PF02689//PF05970 - Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGAGGCATGCCCGATGTGGTGCTGGTGGTGATGAAAGTGATGATGC
Internal bar code:GATTGGAGTGAGCGCATTTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2661
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCGACAGCAGCTACAA
Suggested primer 2:AGGGCGTTACGTTTGACGAT