Insertion junction: CLIP2.041567_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041567
Chromosome:chromosome 12
Location:8448045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549950 (1 of 1) IPR007305//IPR011691//IPR020846 - Vesicle transport protein, Got1/SFT2-like // Vesicle transport protein, SFT2-like // Major facilitator superfamily domain; SFT2-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAATTTGCATCGTCCACAGCATGGGAATACTAATCAACGTTAGGAGGA
Internal bar code:AATGGGTTACAACTTTAAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTTGAAACAGGCGGTGG
Suggested primer 2:GGGGGATGGAGGTAGGACTT