Insertion junction: CLIP2.041574_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041574
Chromosome:chromosome 5
Location:2264699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238052 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGGCGCCGCCTCCGTTTTTCCTGCTGGGATCTCCCTCACTCGCAGT
Internal bar code:TGTCATTTTCTTGATGAGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:412
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTATTGGCGGTGTTGGAG
Suggested primer 2:GTGGAGATGGTGCTCGAGAG