Insertion junction: CLIP2.041579_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041579
Chromosome:chromosome 12
Location:3877836
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515301 (1 of 4) PF13515 - Fusaric acid resistance protein-like (FUSC_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGAGCAGAGCTCTGCAGCCGCAGCCGGAGATTTGCTGGTCGGCTGAG
Internal bar code:TGGAATCGGAAATCCGGGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:872
LEAP-Seq percent confirming:21.7391
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGATGCATATGCGTTGG
Suggested primer 2:GTTATGCCACTCGCTGCATG