Insertion junction: CLIP2.041580_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041580
Chromosome:chromosome 10
Location:6678554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466400 (1 of 8) IPR011257 - DNA glycosylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGCATCGCTGTGGGCCAGTGATGACCCGGCGGTTTGGCGGAGCGTG
Internal bar code:AGTATACCTCACGTACGGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1135
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTATGGAGTGGCGTACG
Suggested primer 2:TACCTTATCGCCCTTCCCCA