Insertion junction: CLIP2.041586_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041586
Chromosome:chromosome 16
Location:2783265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662350 TSPS1,TPS2 (1 of 3) 2.4.1.15 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) / UDP-glucose--glucose-phosphate glucosyltransferase; Trehalose-6-phosphate synthase, class I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGGTAGGTGTTGGTGTGCAGGGTTTGGGAGAGGGGAGGGGGAAGGG
Internal bar code:ACACGCGAAAGACTTAGGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:716
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCGGATCACAGGCAGAG
Suggested primer 2:TCGGATGGGCAGAAGTTGAC