Insertion junction: CLIP2.041587_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041587
Chromosome:chromosome 13
Location:2251281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578451 TSL1 (1 of 2) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase; Leucyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGAGACGCGGCGCACACAGGGGTTTCTGGGGGTCCAGTCTTGTGTG
Internal bar code:GGAAGTTGAAACCACAGGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1658
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATGCAGCACCTCCTCTT
Suggested primer 2:TCGCCATTCAGTAGCTCCAC