Insertion junction: CLIP2.041588_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041588
Chromosome:chromosome 9
Location:5535885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409300 (1 of 5) PF06863 - Protein of unknown function (DUF1254) (DUF1254) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGAGTGCTCACAACCAGATTGCCAGAATAGACAAAAGCCGGCCCAAT
Internal bar code:TACGGGGTTATGTACATACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTGATGGAAAAGGGCA
Suggested primer 2:CACCTCTTGTGCTGCAAACC